GenBank_AE017346_Region_940695_942557
1
GPD
Organism: Cryptococcus neoformans var. neoformans JEC21
2022-06-18T14:57:15
GenBank: <a href="https://www.ncbi.nlm.nih.gov/nucleotide/AE017346.1?report=genbank&log$=nuclalign&blast_rank=1&RID=V6NB9W40013&from=940695&to=942557">AE017346 Region: 940695..942557</a>
This is the promoter of glyceraldehyde-3-phosphate dehydrogenase.
This sequence was directly sent personally by Dr. Chen Ding. We did a BLAST and found a deletion of five nucleotides in comparison with the <i>Cryptococcus neoformans</i> var. <i>neoformans</i> JEC21 chromosome sequence. Thus, we used the genomic sequence (AE017346).
25417972
GenBank_AE017346_Region_940695_942557Sequence
1
tctagaaaccagtcattgaaacggtaacaagcataacttccgatgtagcttaccgcctgccactcgtcccactgttcatcacccgcttcgatcttatgctcaacctcgttccaattcatacccgacttttccaagacgtcactgattggattgatgtaattcttcatgagatagtttatgtggtgatacagataatcaccagtcaaacgtttctggatgagtttctgcatatccggatcatcgttgatttgttcttgcagatcagaacaagcggctttgtcggtaattttgaacttctcattggtacagctagaaatggggcacagttaattttcagtgaaaggtgatcgatagatactgaggaggacatacgattgataatcaatgatattatctaccacgaattcatcaagagcatggatgtgggcaaaagtcatagaattaccttggctgatagtgtgttgggtctgtgagccgccggttgttcccctttgcttccttttgcctcggtatcctttccccttgcccttccccttggttgctcggcctgtatttttgggtccatttgggccaagaggcggttgccaatcatatcttgatgcgactgtctcaagttgttggcttggttgtgcttccggcgttgtactggtaggggtggatacaatggagtattcaaaacgttcatccatggggacattacgttgctgctggcgagctggtagattgggatctagttggaatagtggattatggtgggcaacttcgtatgcgctcatttgagagagagggcaagattcattaagtgaggaaatggatgtcggaggcgagcgcacattatcatccgtgcaatgataagaagtgccaccaaaatggagaggacgagctgcagcatctggctgcgttggagaacgataggaggagacccacaagtgatttctcgagggtcgatgacttgtcgaagcaatagtaggagattgggaaggctggctggagccatggttggtttggtcggccaagggtataaagtgatgagaggatgcctgcattatcgcttcaagctggatttgagataataaatatgggtcataaatgtatggaaagttaatgcaaggttgccgagggaacttgttgaagagatacctcctcagtcctgtaactattataacgaaagatgagcgcgagtggagacgaaggattgatggaagatgcatgacggtatgacggcatctgctgatcttcgctgattacttctacctcagaggcaagaggtaggataatcattattactggaaggggagatttttggactctgattccgataaatgaacgattcaaacgctgatctgccgagcaccccctttatgtgcctgttgaaggtttatccgattcaactgagaaaaagcggtaaccaccgattcaacggctactacggtgttgtgccattttattccaacattgccgagcgacgcgaacacgccggaaaaatcacgtaggtagtgtggagaccccggtgcaacaagcgatgacttaaaggcaaatgccgcggggattttcgccatttgccgctgcattaccaaatgtggcagaggagtttatagaaagaacgagatggagggatttggaaacgaggcggaaacgaacgcatggggagtgaatcagcgaatagaaattcgcgcgagtcgactcgtgccctgtcgcttgcgtcatcgtagtagcccttcagcctttcaactttcccacattctcttgaattattttggctgatttgctttctcttttctctttctcttttcttccaacaatttaacaaactcttttgttctatccattgaatccttctaggagtatacttgcataaataca
GenBank_AE017346_Region_940695_942557_SBOLDesignerActivity
1
Sophia Garcia de Resende
2021-12-10T14:33:56.067Z
Association
1
SBOLDesigner
3.1
SBOLDesigner CAD Tool
SBOLDesigner is a simple, biologist-friendly CAD software tool for creating and manipulating the sequences of genetic constructs using the Synthetic Biology Open Language (SBOL) 2 data model. Throughout the design process, SBOL Visual symbols, a system of schematic glyphs, provide standardized visualizations of individual parts. SBOLDesigner completes a workflow for users of genetic design automation tools. It combines a simple user interface with the power of the SBOL standard and serves as a launchpad for more detailed designs involving simulations and experiments. Some new features in SBOLDesigner are the ability to add variant collections to combinatorial derivations, enumerating those collections, and the ability to view sequence features hierarchically. There are also some small changes to the way that preferences work in regards to saving a design with incomplete sequences.
Samuel Bridge
Chris Myers
Michal Galdzicki
Michael Zhang
John Gennari
Sean Sleight
Bryan Bartley
Evren Sirin