BBa_B0034
1
BBa_B0034
RBS (Elowitz 1999) -- defines RBS efficiency
2003-01-31T12:00:00Z
2015-08-31T04:07:20Z
Released HQ 2013
RBS based on Elowitz repressilator.
false
true
_1_
0
24
7
In stock
false
Varies from -6 to +1 region from original sequence to accomodate BioBricks suffix. <p>No secondary structures are formed in the given RBS region. Users should check for secondary structures induced in the RBS by upstream and downstream elements in the +50 to -50 region, as such structures will greatly affect the strength of the RBS.
Contact info for this part: <a href="mailto:(bchow@media.mit.edu)">Brian Chow</a>
true
Vinay S Mahajan, Voichita D. Marinescu, Brian Chow, Alexander D Wissner-Gross and Peter Carr IAP, 2003.
annotation23325
1
conserved
range23325
1
5
8
BBa_K1020009
1
BBa_K1020009
YbhGFSR operon
2013-09-09T11:00:00Z
2015-05-08T01:08:43Z
E.coli MG1655
ybhGFSR operon encoding an ABC efflux pump
false
false
_1327_
0
16881
9
It's complicated
false
a complete sequence
false
Yue Liu
component2338214
1
BBa_J23100
component2338217
1
BBa_K1020006
component2338216
1
BBa_B0034
annotation2338217
1
BBa_K1020006
range2338217
1
64
5034
annotation2338214
1
BBa_J23100
range2338214
1
1
35
annotation2338216
1
BBa_B0034
range2338216
1
44
55
BBa_K1020006
1
BBa_K1020006
YbhGFSR
2013-09-09T11:00:00Z
2015-05-08T01:08:43Z
E.coli MG1655
ybhGFSR operon encoding an ABC efflux pump
false
false
_1327_
0
16881
9
It's complicated
false
a complete sequence
false
Yue Liu
BBa_J23100
1
BBa_J23100
constitutive promoter family member
2006-08-03T11:00:00Z
2015-08-31T04:08:40Z
Isolated from library of promoters
Released HQ 2013
Replace later
false
true
_52_
0
483
95
In stock
true
N/A
true
John Anderson
BBa_J23100_sequence
1
ttgacggctagctcagtcctaggtacagtgctagc
BBa_B0034_sequence
1
aaagaggagaaa
BBa_K1020006_sequence
1
gtgatgaaaaaacctgtcgtgatcggattggcggtagtggtacttgccgccgtggttgccggaggctactggtggtatcaaagccgccaggataacggcctgacgctgtatggcaacgtggatattcgtacggtaaatcttagtttccgtgttggggggcgcgttgaatcgctggcggtggacgaaggtgatgctatcaaagcgggccaggtgctgggcgaactggatcacaagccgtatgagattgccctgatgcaggcgaaagcgggtgtttcggtggcacaggcgcagtatgacctgatgcttgccgggtatcgcaatgaagaaatcgctcaggccgccgcagcggtgaaacaggcgcaagccgcctatgactatgcgcagaacttctataaccgccagcaagggttgtggaaaagccgcactatttcggcaaatgacctggaaaatgcccgctcctcgcgcgaccaggcgcaggcaacgctgaaatcagcacaggataaattgcgtcagtaccgttccggtaaccgtgaacaggacatcgctcaggcgaaagccagcctcgaacaggcgcaggcgcaactggcgcaggcggagttgaatttacaggactcaacgttgatagccccgtctgatggcacgctgttaacgcgcgcggtggagccaggcacggtcctcaatgaaggtggcacggtgtttaccgtttcactaacgcgtccggtgtgggtgcgcgcttatgttgatgaacgtaatcttgaccaggcccagccggggcgcaaagtgctgctttataccgatggtcgcccggacaagccgtatcacgggcagattggtttcgtttcgccgactgctgaatttaccccgaaaaccgtcgaaacgccggatctgcgtaccgacctcgtctatcgcctgcgtattgtggtgaccgacgccgatgatgcgttacgccagggaatgccagtgacggtacaattcggtgacgaggcaggacatgaatgatgccgttatcacgctgaacggcctggaaaaacgctttccgggcatggacaagcccgccgtcgcgccgctcgattgtaccattcacgccggttatgtgacggggttggtggggccggacggtgcaggtaaaaccacgctgatgcggatgttggcgggattactgaaacccgacagcggcagtgccacggtgattggctttgatccgatcaaaaacgacggcgcgctgcacgccgtgctcggttatatgccgcagaaatttggtctgtatgaagatctcacggtgatggagaacctcaatctgtacgcggatttgcgcagcgtcaccggcgaggcacgtaagcaaacttttgctcgcctgctggagtttacgtctcttgggccgtttaccggacgcctggcgggcaagctctccggtgggatgaaacaaaaactcggtctggcctgtaccctggtgggcgaaccgaaagtgttgctgctcgatgaacccggcgtcggcgttgaccctatctcacggcgcgaactgtggcagatggtgcatgagctggcgggcgaagggatgttaatcctctggagtacctcgtatctcgacgaagccgagcagtgccgtgacgtgttactgatgaacgaaggcgagttgctgtatcagggagaaccaaaagccctgacacaaaccatggccggacgcagctttctgatgaccagtccacacgagggcaaccgcaaactgttgcaacgcgccttgaaactgccgcaggtcagcgacggcatgattcaggggaaatcggtacgtctgatcctcaaaaaagaggccacaccagacgatattcgccatgccgacgggatgccggaaatcaacatcaacgaaactacgccgcgttttgaagatgcgtttattgatttgctgggcggtgccggaacctcggaatcgccgctgggcgcaatattacatacggtagaaggcacacccggcgagacggtgatcgaagcgaaagaactgaccaagaaatttggggattttgccgccaccgatcacgtcaactttgccgttaaacgtggggagatttttggtttgctggggccaaacggcgcgggtaaatcgaccacctttaagatgatgtgcggtttgctggtgccgacttccggccaggcgctggtgctggggatggatctgaaagagagttccggtaaagcgcgccagcatctcggctatatggcgcaaaaattttcgctctacggtaacctgacggtcgaacagaatttacgctttttctctggtgtgtatggcttacgcggtcgggcgcagaacgaaaaaatctcccgcatgagcgaggcgttcggcctgaaaagtatcgcctcccacgccaccgatgaactgccattaggttttaaacagcggctggcgctggcctgttcgctgatgcatgaaccggacattctgtttctcgacgaaccgacttccggcgttgaccccctcacccgccgtgaattttggctgcacatcaacagcatggtagagaaaggcgtcacggtgatggtcaccacccactttatggatgaagcggaatattgcgaccgcatcggcctggtgtaccgcgggaaattaatcgccagcggcacgccggacgatttgaaagcacagtcggctaacgatgagcaacccgatcccaccatggagcaagcctttattcagttgatccacgactgggataaggagcatagcaatgagtaacccgatcctgtcctggcgtcgcgtacgggcgctgtgcgttaaagagacgcggcagatcgttcgcgatccgagtagctggctgattgcggtagtgatcccgctgctactgctgtttatttttggttacggcattaacctcgactccagcaagctgcgggtcgggattttactggaacagcgtagcgaagcggcgctggatttcacccacaccatgaccggttcgccctacatcgacgccaccatcagcgataaccgtcaggaactgatcgccaaaatgcaggcggggaaaattcgcggtctggtggttattccggtggattttgcggaacagatggagcgcgccaacgccaccgcaccgattcaggtgatcaccgacggcagtgagccgaataccgctaactttgtacaggggtatgtcgaagggatctggcagatctggcaaatgcagcgagcggaggacaacgggcagacttttgaaccgcttattgatgtacaaacccgctactggtttaacccggcggcgattagccagcacttcattatccccggtgcggtgaccattatcatgacggtcatcggcgcgattctcacctcgctggtggtggcgcgagaatgggaacgcggcaccatggaggctctgctctctacggagattacccgcacggaactgctgctgtgtaagctgatcccttattactttctcgggatgctggcgatgttgctgtgtatgctggtgtcagtgtttattctcggcgtgccgtatcgcgggtcgctgctgattctgttttttatctccagcctgtttttactcagtaccctggggatggggctgctgatttccacgattacccgcaaccagttcaatgccgctcaggtcgccctgaacgccgcttttctgccgtcgattatgctttccggctttatttttcagatcgacagtatgcccgcggtgatccgcgcggtgacgtacattattcccgctcgttatttcgtcagcaccctgcaaagcctgttcctcgccgggaatattccagtggtgctggtggtaaacgtgctgtttttgatcgcttcggcggtgatgtttatcggcctgacgtggctgaaaaccaaacgtcggctggattagggagaagagcatgtttcatcgcttatggacgttaatccgcaaagagttgcagtcgttgctgcgcgaaccgcaaacccgcgcgattctgattttacccgtgctaattcaggtgatcctgttcccgttcgccgccacgctggaagtgactaacgccaccatcgccatctacgatgaagataacggcgagcattcggtggagctgacccaacgttttgcccgcgccagcgcctttactcatgtgctgctgctgaaaagcccacaggagatccgcccaaccatcgacacacaaaaggcgttactactggtgcgtttcccggctgacttctcgcgcaaactggataccttccagaccgcgcctttgcagttgatcctcgacgggcgtaactccaacagtgcgcaaattgccgccaactacctgcaacagatcgtcaaaaattatcagcaggagctgctggaaggaaaaccgaaacctaacaacagcgagctggtggtacgcaactggtataacccgaatctcgactacaaatggtttgtggtgccgtcactgatcgccatgatcaccactatcggcgtaatgatcgtcacttcactttccgtcgcccgcgaacgtgaacaaggtacgctcgatcagctactggtttcgccgctcaccacctggcagatcttcatcggcaaagccgtaccggcgttaattgtcgccaccttccaggccaccattgtgctggcgattggtatctgggcgtatcaaatccccttcgccggatcgctggcgctgttctactttacgatggtgatttatggtttatcgctggtgggattcggtctgttgatttcatcactctgttcaacacaacagcaggcgtttatcggcgtgtttgtctttatgatgcccgccattctcctttccggttacgtttctccggtggaaaacatgccggtatggctgcaaaacctgacgtggattaaccctattcgccactttacggacattaccaagcagatttatttgaaggatgcgagtctggatattgtgtggaatagtttgtggccgctactggtgataacggccacgacagggtcagcggcgtacgcgatgtttagacgtaaggtgatgtaa
BBa_K1020009_sequence
1
ttgacggctagctcagtcctaggtacagtgctagctactagagaaagaggagaaatactagaggtgatgaaaaaacctgtcgtgatcggattggcggtagtggtacttgccgccgtggttgccggaggctactggtggtatcaaagccgccaggataacggcctgacgctgtatggcaacgtggatattcgtacggtaaatcttagtttccgtgttggggggcgcgttgaatcgctggcggtggacgaaggtgatgctatcaaagcgggccaggtgctgggcgaactggatcacaagccgtatgagattgccctgatgcaggcgaaagcgggtgtttcggtggcacaggcgcagtatgacctgatgcttgccgggtatcgcaatgaagaaatcgctcaggccgccgcagcggtgaaacaggcgcaagccgcctatgactatgcgcagaacttctataaccgccagcaagggttgtggaaaagccgcactatttcggcaaatgacctggaaaatgcccgctcctcgcgcgaccaggcgcaggcaacgctgaaatcagcacaggataaattgcgtcagtaccgttccggtaaccgtgaacaggacatcgctcaggcgaaagccagcctcgaacaggcgcaggcgcaactggcgcaggcggagttgaatttacaggactcaacgttgatagccccgtctgatggcacgctgttaacgcgcgcggtggagccaggcacggtcctcaatgaaggtggcacggtgtttaccgtttcactaacgcgtccggtgtgggtgcgcgcttatgttgatgaacgtaatcttgaccaggcccagccggggcgcaaagtgctgctttataccgatggtcgcccggacaagccgtatcacgggcagattggtttcgtttcgccgactgctgaatttaccccgaaaaccgtcgaaacgccggatctgcgtaccgacctcgtctatcgcctgcgtattgtggtgaccgacgccgatgatgcgttacgccagggaatgccagtgacggtacaattcggtgacgaggcaggacatgaatgatgccgttatcacgctgaacggcctggaaaaacgctttccgggcatggacaagcccgccgtcgcgccgctcgattgtaccattcacgccggttatgtgacggggttggtggggccggacggtgcaggtaaaaccacgctgatgcggatgttggcgggattactgaaacccgacagcggcagtgccacggtgattggctttgatccgatcaaaaacgacggcgcgctgcacgccgtgctcggttatatgccgcagaaatttggtctgtatgaagatctcacggtgatggagaacctcaatctgtacgcggatttgcgcagcgtcaccggcgaggcacgtaagcaaacttttgctcgcctgctggagtttacgtctcttgggccgtttaccggacgcctggcgggcaagctctccggtgggatgaaacaaaaactcggtctggcctgtaccctggtgggcgaaccgaaagtgttgctgctcgatgaacccggcgtcggcgttgaccctatctcacggcgcgaactgtggcagatggtgcatgagctggcgggcgaagggatgttaatcctctggagtacctcgtatctcgacgaagccgagcagtgccgtgacgtgttactgatgaacgaaggcgagttgctgtatcagggagaaccaaaagccctgacacaaaccatggccggacgcagctttctgatgaccagtccacacgagggcaaccgcaaactgttgcaacgcgccttgaaactgccgcaggtcagcgacggcatgattcaggggaaatcggtacgtctgatcctcaaaaaagaggccacaccagacgatattcgccatgccgacgggatgccggaaatcaacatcaacgaaactacgccgcgttttgaagatgcgtttattgatttgctgggcggtgccggaacctcggaatcgccgctgggcgcaatattacatacggtagaaggcacacccggcgagacggtgatcgaagcgaaagaactgaccaagaaatttggggattttgccgccaccgatcacgtcaactttgccgttaaacgtggggagatttttggtttgctggggccaaacggcgcgggtaaatcgaccacctttaagatgatgtgcggtttgctggtgccgacttccggccaggcgctggtgctggggatggatctgaaagagagttccggtaaagcgcgccagcatctcggctatatggcgcaaaaattttcgctctacggtaacctgacggtcgaacagaatttacgctttttctctggtgtgtatggcttacgcggtcgggcgcagaacgaaaaaatctcccgcatgagcgaggcgttcggcctgaaaagtatcgcctcccacgccaccgatgaactgccattaggttttaaacagcggctggcgctggcctgttcgctgatgcatgaaccggacattctgtttctcgacgaaccgacttccggcgttgaccccctcacccgccgtgaattttggctgcacatcaacagcatggtagagaaaggcgtcacggtgatggtcaccacccactttatggatgaagcggaatattgcgaccgcatcggcctggtgtaccgcgggaaattaatcgccagcggcacgccggacgatttgaaagcacagtcggctaacgatgagcaacccgatcccaccatggagcaagcctttattcagttgatccacgactgggataaggagcatagcaatgagtaacccgatcctgtcctggcgtcgcgtacgggcgctgtgcgttaaagagacgcggcagatcgttcgcgatccgagtagctggctgattgcggtagtgatcccgctgctactgctgtttatttttggttacggcattaacctcgactccagcaagctgcgggtcgggattttactggaacagcgtagcgaagcggcgctggatttcacccacaccatgaccggttcgccctacatcgacgccaccatcagcgataaccgtcaggaactgatcgccaaaatgcaggcggggaaaattcgcggtctggtggttattccggtggattttgcggaacagatggagcgcgccaacgccaccgcaccgattcaggtgatcaccgacggcagtgagccgaataccgctaactttgtacaggggtatgtcgaagggatctggcagatctggcaaatgcagcgagcggaggacaacgggcagacttttgaaccgcttattgatgtacaaacccgctactggtttaacccggcggcgattagccagcacttcattatccccggtgcggtgaccattatcatgacggtcatcggcgcgattctcacctcgctggtggtggcgcgagaatgggaacgcggcaccatggaggctctgctctctacggagattacccgcacggaactgctgctgtgtaagctgatcccttattactttctcgggatgctggcgatgttgctgtgtatgctggtgtcagtgtttattctcggcgtgccgtatcgcgggtcgctgctgattctgttttttatctccagcctgtttttactcagtaccctggggatggggctgctgatttccacgattacccgcaaccagttcaatgccgctcaggtcgccctgaacgccgcttttctgccgtcgattatgctttccggctttatttttcagatcgacagtatgcccgcggtgatccgcgcggtgacgtacattattcccgctcgttatttcgtcagcaccctgcaaagcctgttcctcgccgggaatattccagtggtgctggtggtaaacgtgctgtttttgatcgcttcggcggtgatgtttatcggcctgacgtggctgaaaaccaaacgtcggctggattagggagaagagcatgtttcatcgcttatggacgttaatccgcaaagagttgcagtcgttgctgcgcgaaccgcaaacccgcgcgattctgattttacccgtgctaattcaggtgatcctgttcccgttcgccgccacgctggaagtgactaacgccaccatcgccatctacgatgaagataacggcgagcattcggtggagctgacccaacgttttgcccgcgccagcgcctttactcatgtgctgctgctgaaaagcccacaggagatccgcccaaccatcgacacacaaaaggcgttactactggtgcgtttcccggctgacttctcgcgcaaactggataccttccagaccgcgcctttgcagttgatcctcgacgggcgtaactccaacagtgcgcaaattgccgccaactacctgcaacagatcgtcaaaaattatcagcaggagctgctggaaggaaaaccgaaacctaacaacagcgagctggtggtacgcaactggtataacccgaatctcgactacaaatggtttgtggtgccgtcactgatcgccatgatcaccactatcggcgtaatgatcgtcacttcactttccgtcgcccgcgaacgtgaacaaggtacgctcgatcagctactggtttcgccgctcaccacctggcagatcttcatcggcaaagccgtaccggcgttaattgtcgccaccttccaggccaccattgtgctggcgattggtatctgggcgtatcaaatccccttcgccggatcgctggcgctgttctactttacgatggtgatttatggtttatcgctggtgggattcggtctgttgatttcatcactctgttcaacacaacagcaggcgtttatcggcgtgtttgtctttatgatgcccgccattctcctttccggttacgtttctccggtggaaaacatgccggtatggctgcaaaacctgacgtggattaaccctattcgccactttacggacattaccaagcagatttatttgaaggatgcgagtctggatattgtgtggaatagtttgtggccgctactggtgataacggccacgacagggtcagcggcgtacgcgatgtttagacgtaaggtgatgtaa
igem2sbol
1
iGEM to SBOL conversion
Conversion of the iGEM parts registry to SBOL2.1
Chris J. Myers
James Alastair McLaughlin
2017-03-06T15:00:00.000Z