RBS-spoVG

BBa_K143021 Version 1

Component

Source:
http://parts.igem.org/Part:BBa_K143021
Generated By: https://synbiohub.org/public/igem/igem2sbol/1
Created by: James Chappell
Date created: 2008-09-16 11:00:00
Date modified: 2015-05-08 01:10:23

SpoVG ribosome binding site (RBS) for B. subtilis



Types
DnaRegion

Roles
RBS

ribosome_entry_site

Sequences BBa_K143021_sequence (Version 1)

Description

Description: SpoVG is an endogenous ribosome binding site from B.subtilis. The sequence of the spoVG ribosome binding site is AAAGGUGGUGA which is complementary to the sequence UUUCCUCCACU from the 3' region of the 16s rRNA from B.subtilis. Previous research showed that the predicted binding energy of the 16s rRNA to the RBS is -19kcal 1

Notes

In order to ensure that the RBS is functional the actual ribosome binding site was maintained and the distance between the RBS and the start codon maintained. In order to conform to the biobrick standard the sequence flanking the RBS had to be changed but the distance between the promoter and RBS, and start codon and RBS was maintained.

Source

The sequence was taken from a previous research paper [1] and was constructed by Geneart.

Sequence Annotation Location Component / Role(s)
rbs
1,12
feature/rbs ribosome_entry_site
igem#experience
Works
 
igem#partStatus
Released HQ 2013
igem#sampleStatus
In stock
igem#status
Available
 
synbiohub#ownedBy
user/james
 
synbiohub#ownedBy
user/myers
 
synbiohub#topLevel
BBa_K143021/1