BBa_K1763421

BBa_K1763421 Version 1

Component

Source:
http://parts.igem.org/Part:BBa_K1763421
Generated By: https://synbiohub.org/public/igem/igem2sbol/1
Created by: Tyler Lee
Date created: 2015-09-10 11:00:00
Date modified: 2016-10-02 06:33:24

PCquad Mutant 10



Types
DnaRegion

Roles
engineered_region

Composite

Sequences BBa_K1763421_sequence (Version 1)

Description

Subunit of a 12-subunit protein cage with a thrombin cleavage sequence inserted between residues 243 and 248 (ALPSAE to ALPGLVPRGSGSAE).

Notes

Considered the area to insert the cleavage sequence. This mutation was selected by examining the secondary structure to ensure minimal disruption of existing alpha-helices or beta sheets, sites were sandwiched by glycine residues, and used PyMOL to check if the site would be accessible to the protease. Geometric accessibility by the protease thrombin and minimal speculated extent of conformational changes by insertion.

Source

Bromoperoxidase (trimer) and M1 Virus Matrix Protein (dimer) linked with an alpha helix.

Sequence Annotation Location Component / Role(s)
T7 Promoter
RBS
Scar
Double Stop
Start
6x His Tag
PCquad Mutant 10
1,22
24,28
34,39
1425,1430
40,42
1386,1400
40,1385
promoter feature/promoter
feature/rbs ribosome_entry_site
feature/scar
feature/stop stop_codon
feature/start start_codon
sequence_feature feature/misc
engineered_region feature/BioBrick
igem#status
Planning
 
synbiohub#ownedBy
user/james
 
synbiohub#ownedBy
user/myers
 
synbiohub#topLevel
BBa_K1763421/1