BBa_K2070026
1
BBa_K2070026
Constitutive ecf16 generator with ecf 16 inducible GFP reporter
2016-10-19T11:00:00Z
2016-10-20T05:43:06Z
Assembly
This part was used to test the functionality of ECF sigma 16 and its cognate promoter
false
false
_2538_
31975
31975
9
false
To be edited
false
Rina Sakata
component2525298
1
BBa_K2070006
component2525285
1
BBa_K2070016
annotation2525285
1
BBa_K2070016
range2525285
1
1
787
annotation2525298
1
BBa_K2070006
range2525298
1
796
1759
BBa_J23101
1
BBa_J23101
constitutive promoter family member
2006-08-03T11:00:00Z
2015-08-31T04:08:40Z
later
Released HQ 2013
later
false
true
_52_
0
483
95
In stock
true
N/A
true
John Anderson
BBa_B0032
1
BBa_B0032
RBS.3 (medium) -- derivative of BBa_0030
2003-01-31T12:00:00Z
2015-08-31T04:07:20Z
Released HQ 2013
Weak1 RBS based on Ron Weiss thesis. Strength is considered relative to <bb_part>BBa_B0030</bb_part>, <bb_part>BBa_B0031</bb_part>, <bb_part>BBa_B0033</bb_part>.
false
true
_41_44_48_46_1_
0
24
7
In stock
false
Varies from -6 to +1 region from original sequence to accomodate BioBricks suffix ("RBS-2" in figure 4-14 of thesis). <P>
Contact info for this part: <a href="mailto:(bchow@media.mit.edu)">Brian Chow</a>
true
Vinay S Mahajan, Voichita D. Marinescu, Brian Chow, Alexander D Wissner-Gross and Peter Carr IAP, 2003.
annotation1709
1
RBS-3\Weak
range1709
1
1
13
annotation1710
1
RBS
range1710
1
7
10
annotation7027
1
BBa_B0032
range7027
1
1
13
BBa_K2070001
1
ecf16
ecf16
2016-10-08T11:00:00Z
2016-10-20T05:45:54Z
Pseudomonas entomophila L48
ecf16 is a sigma factor, one of transcription factors, which activates ecf16 promoter (BBa_K2070000).
false
false
_2538_
31975
31975
9
false
For detail, see our wiki
false
iGEM UT-Tokyo 2016
BBa_E0240
1
GFP report
GFP generator
2004-10-17T11:00:00Z
2015-08-31T04:07:26Z
Released HQ 2013
B0032.E0040.B0015
false
true
_11_1_
0
61
7
In stock
false
true
Jennifer Braff
component1249231
1
BBa_B0012
component1249213
1
BBa_B0032
component1249221
1
BBa_B0010
component1249216
1
BBa_E0040
annotation1249216
1
BBa_E0040
range1249216
1
20
739
annotation1249221
1
BBa_B0010
range1249221
1
748
827
annotation1249213
1
BBa_B0032
range1249213
1
1
13
annotation1249231
1
BBa_B0012
range1249231
1
836
876
BBa_B0012
1
BBa_B0012
TE from coliphageT7
2003-01-31T12:00:00Z
2015-08-31T04:07:20Z
Derived from the TE terminator of T7 bacteriophage between Genes 1.3 and 1.4 <genbank>V01146</genbank>.
Released HQ 2013
Transcription terminator for the <i>E.coli</i> RNA polymerase.
false
false
_1_
0
24
7
In stock
false
<P> <P>Suggested by Sri Kosuri and Drew Endy as a high efficiency terminator. The 5' end cutoff was placed immediately after the TAA stop codon and the 3' end cutoff was placed just prior to the RBS of Gene 1.4 (before AAGGAG).<P> Use anywhere transcription should be stopped when the gene of interest is upstream of this terminator.
false
Reshma Shetty
annotation1686
1
T7 TE
range1686
1
8
27
annotation7020
1
BBa_B0012
range7020
1
1
41
annotation1687
1
stop
range1687
1
34
34
annotation1690
1
polya
range1690
1
28
41
BBa_E0040
1
GFP
green fluorescent protein derived from jellyfish Aequeora victoria wild-type GFP (SwissProt: P42212
2004-09-29T11:00:00Z
2016-01-26T02:09:38Z
Released HQ 2013
GFP (mut3b) [note that this part does not have a barcode]
false
true
_11_1_
4206
61
7
In stock
false
true
jcbraff
annotation1934520
1
GFP protein
range1934520
1
1
720
BBa_K2070000
1
Psigma16
ecf16 promoter
2016-10-08T11:00:00Z
2016-10-20T05:45:39Z
Pseudomonas entomophila L48
ecf20 activates the expression of the downstream genes of this promoter.
false
false
_2538_
31975
31975
9
false
For detail, see our wiki
false
iGEM UT-Tokyo 2016
BBa_K2070016
1
BBa_K2070016
Constitutive ecf16 generator
2016-10-08T11:00:00Z
2016-10-20T05:20:31Z
To be edited
To be edited
false
false
_2538_
31975
31975
9
false
To be edited
false
iGEM UT-Tokyo 2016
component2510074
1
BBa_B0032
component2510076
1
BBa_K2070001
component2510083
1
BBa_B0015
component2510072
1
BBa_J23101
annotation2510072
1
BBa_J23101
range2510072
1
1
35
annotation2510083
1
BBa_B0015
range2510083
1
659
787
annotation2510074
1
BBa_B0032
range2510074
1
44
56
annotation2510076
1
BBa_K2070001
range2510076
1
63
650
BBa_K2070006
1
BBa_K2070006
ecf16 inducible GFP reporter
2016-10-08T11:00:00Z
2016-10-20T05:11:36Z
To be edited
to be edited
false
false
_2538_
31975
31975
9
false
To be edited
false
iGEM UT-Tokyo 2016
component2525147
1
BBa_K2070000
component2525158
1
BBa_E0240
annotation2525147
1
BBa_K2070000
range2525147
1
1
80
annotation2525158
1
BBa_E0240
range2525158
1
89
964
BBa_B0015
1
BBa_B0015
double terminator (B0010-B0012)
2003-07-16T11:00:00Z
2015-08-31T04:07:20Z
Released HQ 2013
Double terminator consisting of BBa_B0010 and BBa_B0012
false
true
_1_
0
24
7
In stock
false
true
Reshma Shetty
component1916610
1
BBa_B0010
component1916612
1
BBa_B0012
annotation1916612
1
BBa_B0012
range1916612
1
89
129
annotation1916610
1
BBa_B0010
range1916610
1
1
80
BBa_B0010
1
BBa_B0010
T1 from E. coli rrnB
2003-11-19T12:00:00Z
2015-08-31T04:07:20Z
Transcriptional terminator consisting of a 64 bp stem-loop.
false
false
_1_
0
24
7
In stock
false
true
Randy Rettberg
annotation7018
1
BBa_B0010
range7018
1
1
80
annotation4184
1
stem_loop
range4184
1
12
55
BBa_B0010_sequence
1
ccaggcatcaaataaaacgaaaggctcagtcgaaagactgggcctttcgttttatctgttgtttgtcggtgaacgctctc
BBa_K2070001_sequence
1
atgcagcgcaccaacagccaggatgtgctgagcacccgcgaaagccagcttcaggcgctgctgcttcagggcctggcgggcgatacctttgcgtatcgccagtttctgaccgcgctggcggcgcatattcgcggctttctgcgccgccgcctgccgcagcatccggcggaagtggaagatctgcttcaggaagtgctgctggcggtgcataacgcgcgccatacctatcaggcgcgccagccgctgaccgcgtgggtgcaggcgattgcgcgctataaactggcggatcatctgcgcagccatgcgcgccgcgaagcgcgccatgatctgctggatgatgatagcgaactgtttgcggcgagcgatgaacagccggcgcaggcgagccgcgatctgggcaaactgctgggccagctgccggatcgccagcgcctgccgattgtgcatgtgaaactggaaggcctgagcgtggaagaaaccgcgcagattaccggcctgagcagcagcgcggtgaaagtgggcattcatcgcggcctgaaagcgctgggcaaactgattcgcggcaaaggccatgatgaagatcgctaa
BBa_K2070016_sequence
1
tttacagctagctcagtcctaggtattatgctagctactagagtcacacaggaaagtactagatgcagcgcaccaacagccaggatgtgctgagcacccgcgaaagccagcttcaggcgctgctgcttcagggcctggcgggcgatacctttgcgtatcgccagtttctgaccgcgctggcggcgcatattcgcggctttctgcgccgccgcctgccgcagcatccggcggaagtggaagatctgcttcaggaagtgctgctggcggtgcataacgcgcgccatacctatcaggcgcgccagccgctgaccgcgtgggtgcaggcgattgcgcgctataaactggcggatcatctgcgcagccatgcgcgccgcgaagcgcgccatgatctgctggatgatgatagcgaactgtttgcggcgagcgatgaacagccggcgcaggcgagccgcgatctgggcaaactgctgggccagctgccggatcgccagcgcctgccgattgtgcatgtgaaactggaaggcctgagcgtggaagaaaccgcgcagattaccggcctgagcagcagcgcggtgaaagtgggcattcatcgcggcctgaaagcgctgggcaaactgattcgcggcaaaggccatgatgaagatcgctaatactagagccaggcatcaaataaaacgaaaggctcagtcgaaagactgggcctttcgttttatctgttgtttgtcggtgaacgctctctactagagtcacactggctcaccttcgggtgggcctttctgcgtttata
BBa_K2070000_sequence
1
cttggatgaaaagaaacccaccgacggtgtaaccctggcggccgatgcaacgaactaactcacaggacgtgctcagcacc
BBa_B0032_sequence
1
tcacacaggaaag
BBa_E0240_sequence
1
tcacacaggaaagtactagatgcgtaaaggagaagaacttttcactggagttgtcccaattcttgttgaattagatggtgatgttaatgggcacaaattttctgtcagtggagagggtgaaggtgatgcaacatacggaaaacttacccttaaatttatttgcactactggaaaactacctgttccatggccaacacttgtcactactttcggttatggtgttcaatgctttgcgagatacccagatcatatgaaacagcatgactttttcaagagtgccatgcccgaaggttatgtacaggaaagaactatatttttcaaagatgacgggaactacaagacacgtgctgaagtcaagtttgaaggtgatacccttgttaatagaatcgagttaaaaggtattgattttaaagaagatggaaacattcttggacacaaattggaatacaactataactcacacaatgtatacatcatggcagacaaacaaaagaatggaatcaaagttaacttcaaaattagacacaacattgaagatggaagcgttcaactagcagaccattatcaacaaaatactccaattggcgatggccctgtccttttaccagacaaccattacctgtccacacaatctgccctttcgaaagatcccaacgaaaagagagaccacatggtccttcttgagtttgtaacagctgctgggattacacatggcatggatgaactatacaaataataatactagagccaggcatcaaataaaacgaaaggctcagtcgaaagactgggcctttcgttttatctgttgtttgtcggtgaacgctctctactagagtcacactggctcaccttcgggtgggcctttctgcgtttata
BBa_K2070026_sequence
1
tttacagctagctcagtcctaggtattatgctagctactagagtcacacaggaaagtactagatgcagcgcaccaacagccaggatgtgctgagcacccgcgaaagccagcttcaggcgctgctgcttcagggcctggcgggcgatacctttgcgtatcgccagtttctgaccgcgctggcggcgcatattcgcggctttctgcgccgccgcctgccgcagcatccggcggaagtggaagatctgcttcaggaagtgctgctggcggtgcataacgcgcgccatacctatcaggcgcgccagccgctgaccgcgtgggtgcaggcgattgcgcgctataaactggcggatcatctgcgcagccatgcgcgccgcgaagcgcgccatgatctgctggatgatgatagcgaactgtttgcggcgagcgatgaacagccggcgcaggcgagccgcgatctgggcaaactgctgggccagctgccggatcgccagcgcctgccgattgtgcatgtgaaactggaaggcctgagcgtggaagaaaccgcgcagattaccggcctgagcagcagcgcggtgaaagtgggcattcatcgcggcctgaaagcgctgggcaaactgattcgcggcaaaggccatgatgaagatcgctaatactagagccaggcatcaaataaaacgaaaggctcagtcgaaagactgggcctttcgttttatctgttgtttgtcggtgaacgctctctactagagtcacactggctcaccttcgggtgggcctttctgcgtttatatactagagcttggatgaaaagaaacccaccgacggtgtaaccctggcggccgatgcaacgaactaactcacaggacgtgctcagcacctactagagtcacacaggaaagtactagatgcgtaaaggagaagaacttttcactggagttgtcccaattcttgttgaattagatggtgatgttaatgggcacaaattttctgtcagtggagagggtgaaggtgatgcaacatacggaaaacttacccttaaatttatttgcactactggaaaactacctgttccatggccaacacttgtcactactttcggttatggtgttcaatgctttgcgagatacccagatcatatgaaacagcatgactttttcaagagtgccatgcccgaaggttatgtacaggaaagaactatatttttcaaagatgacgggaactacaagacacgtgctgaagtcaagtttgaaggtgatacccttgttaatagaatcgagttaaaaggtattgattttaaagaagatggaaacattcttggacacaaattggaatacaactataactcacacaatgtatacatcatggcagacaaacaaaagaatggaatcaaagttaacttcaaaattagacacaacattgaagatggaagcgttcaactagcagaccattatcaacaaaatactccaattggcgatggccctgtccttttaccagacaaccattacctgtccacacaatctgccctttcgaaagatcccaacgaaaagagagaccacatggtccttcttgagtttgtaacagctgctgggattacacatggcatggatgaactatacaaataataatactagagccaggcatcaaataaaacgaaaggctcagtcgaaagactgggcctttcgttttatctgttgtttgtcggtgaacgctctctactagagtcacactggctcaccttcgggtgggcctttctgcgtttata
BBa_E0040_sequence
1
atgcgtaaaggagaagaacttttcactggagttgtcccaattcttgttgaattagatggtgatgttaatgggcacaaattttctgtcagtggagagggtgaaggtgatgcaacatacggaaaacttacccttaaatttatttgcactactggaaaactacctgttccatggccaacacttgtcactactttcggttatggtgttcaatgctttgcgagatacccagatcatatgaaacagcatgactttttcaagagtgccatgcccgaaggttatgtacaggaaagaactatatttttcaaagatgacgggaactacaagacacgtgctgaagtcaagtttgaaggtgatacccttgttaatagaatcgagttaaaaggtattgattttaaagaagatggaaacattcttggacacaaattggaatacaactataactcacacaatgtatacatcatggcagacaaacaaaagaatggaatcaaagttaacttcaaaattagacacaacattgaagatggaagcgttcaactagcagaccattatcaacaaaatactccaattggcgatggccctgtccttttaccagacaaccattacctgtccacacaatctgccctttcgaaagatcccaacgaaaagagagaccacatggtccttcttgagtttgtaacagctgctgggattacacatggcatggatgaactatacaaataataa
BBa_K2070006_sequence
1
cttggatgaaaagaaacccaccgacggtgtaaccctggcggccgatgcaacgaactaactcacaggacgtgctcagcacctactagagtcacacaggaaagtactagatgcgtaaaggagaagaacttttcactggagttgtcccaattcttgttgaattagatggtgatgttaatgggcacaaattttctgtcagtggagagggtgaaggtgatgcaacatacggaaaacttacccttaaatttatttgcactactggaaaactacctgttccatggccaacacttgtcactactttcggttatggtgttcaatgctttgcgagatacccagatcatatgaaacagcatgactttttcaagagtgccatgcccgaaggttatgtacaggaaagaactatatttttcaaagatgacgggaactacaagacacgtgctgaagtcaagtttgaaggtgatacccttgttaatagaatcgagttaaaaggtattgattttaaagaagatggaaacattcttggacacaaattggaatacaactataactcacacaatgtatacatcatggcagacaaacaaaagaatggaatcaaagttaacttcaaaattagacacaacattgaagatggaagcgttcaactagcagaccattatcaacaaaatactccaattggcgatggccctgtccttttaccagacaaccattacctgtccacacaatctgccctttcgaaagatcccaacgaaaagagagaccacatggtccttcttgagtttgtaacagctgctgggattacacatggcatggatgaactatacaaataataatactagagccaggcatcaaataaaacgaaaggctcagtcgaaagactgggcctttcgttttatctgttgtttgtcggtgaacgctctctactagagtcacactggctcaccttcgggtgggcctttctgcgtttata
BBa_J23101_sequence
1
tttacagctagctcagtcctaggtattatgctagc
BBa_B0012_sequence
1
tcacactggctcaccttcgggtgggcctttctgcgtttata
BBa_B0015_sequence
1
ccaggcatcaaataaaacgaaaggctcagtcgaaagactgggcctttcgttttatctgttgtttgtcggtgaacgctctctactagagtcacactggctcaccttcgggtgggcctttctgcgtttata
igem2sbol
1
iGEM to SBOL conversion
Conversion of the iGEM parts registry to SBOL2.1
Chris J. Myers
James Alastair McLaughlin
2017-03-06T15:00:00.000Z