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Public
igem2sbol (iGEM to SBOL conversion)

version 1

Conversion of the iGEM parts registry to SBOL2.1

Public
SyBiOntKB2sbol (SyBiOntKB to SBOL conversion)

version 1

Conversion of the Synthetic Biology Ontology knowledge base to SBOL 2.1

Remote
CelloUCF2SBOL (Cello UCF to SBOL)

version 1

A script to convert Cello UCF parts and metadata to SBOL 2 documents.

Remote
cello2sbol (Cello UCF to SBOL conversion)

version 1

Conversion of the Cello UCF parts and metadata to SBOL2.1

Remote
CelloUCF2sbol_Activity (Cello UCF to SBOL conversion)

version 1

Conversion of the Cello UCF parts and metadata to SBOL 2 documents.

Remote
CelloUCF2SBOL (Cello UCF to SBOL)

version 1

A script to convert Cello UCF parts and metadata to SBOL 2 documents.

Remote
CelloUCF2SBOL (Cello UCF to SBOL)

version 1

A script to convert Cello UCF parts and metadata to SBOL 2 documents.

Remote
phoenix2sbol (Phoenix UCF to SBOL conversion)

version 0.3

Conversion of the Phoenix UCF parts and metadata to SBOL2

Remote
CelloUCF2sbol_Activity (Cello UCF to SBOL conversion)

version 1

Conversion of the Cello UCF parts and metadata to SBOL 2 documents.

Remote
CelloUCF2sbol_Activity (Cello UCF to SBOL conversion)

version 1

Conversion of the Cello UCF parts and metadata to SBOL 2 documents.

Public
BBa_B0012

version 1

TE from coliphageT7

Public
BBa_B0034

version 1

RBS (Elowitz 1999) -- defines RBS efficiency

Public
BBa_B0032

version 1

RBS.3 (medium) -- derivative of BBa_0030

Public
SBOLDesigner (SBOLDesigner CAD Tool)

version 3.0

SBOLDesigner is a simple, biologist-friendly CAD software tool for creating and manipulating the sequences of genetic constructs using the Synthetic Biology Open Language (SBOL) 2 data model. Throughout the design process, SBOL Visual symbols, a system of schematic glyphs, provide standardized visualizations of individual parts. SBOLDesigner completes a workflow for users of genetic design automation tools. It combines a simple user interface with the power of the SBOL standard and serves as a launchpad for more detailed designs involving simulations and experiments. Some new features in SBOLDesigner are SynBioHub integration, local repositories, importing of parts/sequences from existing files, import and export of GenBank and FASTA files, extended role ontology support, the ability to partially open designs with multiple root ComponentDefinitions, backward compatibility with SBOL 1.1, and versioning.

Public
BBa_E1010 (mRFP1)

version 1

**highly** engineered mutant of red fluorescent protein from Discosoma striata (coral)

Public
BBa_B0031

version 1

RBS.2 (weak) -- derivative of BBa_0030

Public
BBa_E0020 (ecfp)

version 1

engineered cyan fluorescent protein derived from A. victoria GFP

Public
BBa_E0030 (eyfp)

version 1

enhanced yellow fluorescent protein derived from A. victoria GFP

Public
BBa_B0033

version 1

RBS.4 (weaker) -- derivative of BBa_0030

Public
BBa_E0032 (YFP)

version 1

enhanced yellow fluorescent protein derived from A. victoria GFP

Public
SBOLDesigner (SBOLDesigner CAD Tool)

version 2.2

SBOLDesigner is a simple, biologist-friendly CAD software tool for creating and manipulating the sequences of genetic constructs using the Synthetic Biology Open Language (SBOL) 2.0 data model. Throughout the design process, SBOL Visual symbols, a system of schematic glyphs, provide standardized visualizations of individual parts. SBOLDesigner completes a workflow for users of genetic design automation tools. It combines a simple user interface with the power of the SBOL standard and serves as a launchpad for more detailed designs involving simulations and experiments. Some new features in SBOLDesigner are SynBioHub integration, local repositories, importing of parts/sequences from existing files, import and export of GenBank and FASTA files, extended role ontology support, the ability to partially open designs with multiple root ComponentDefinitions, backward compatibility with SBOL 1.1, and versioning.

Public
BBa_E0022 (ECFP)

version 1

enhanced cyan fluorescent protein derived from A. victoria GFP

Public
BBa_J04450

version 1

RFP Coding Device

Remote
Damp_Lab_collection (Damp Lab)

version 1

A collection of consistent and well characterized parts produced by the DAMP lab.

Public
BBa_J15001

version 1

strong synthetic E. coli ribosome binding site with SacI site.

Public
BBa_J44001

version 1

Reverse RBS (RBS<sub>rev</sub>) -- corresponds to BBa_B0030

Public
BBa_I712009 (CD4 signal)

version 1

CD4 signal peptide; localizes to plasma membrane

Public
BBa_K209402

version 1

AarI A-B part, signal sequence-FLAG-YFP [SSFYFP]

Public
BBa_R0063 (lux pL)

version 1

Promoter (luxR & HSL regulated -- lux pL)<br>

Public
BBa_B0040 (spacer)

version 1

Spacer.1 (generic)

Public
BBa_K1114300

version 1

This is the MoClo formatted part of BBa_B0015.

Public
BBa_K103006 (OmpA)

version 1

OmpA outer membrane protein A fused to linker; displays proteins on cell surface

Public
BBa_J54103

version 1

Promoterless-GFP(A)

Public
BBa_J01003 (OriTR)

version 1

OriT-R (Origin of transfer for the R-plasmid nic region)

Public
igem_collection (iGEM Parts Registry)

version 1

The iGEM Registry is a growing collection of genetic parts that can be mixed and matched to build synthetic biology devices and systems. As part of the synthetic biology community's efforts to make biology easier to engineer, it provides a source of genetic parts to iGEM teams and academic labs.

Public
BBa_K934001 (phaC1-A-B1)

version 1

phaC1-A-B1 [P(3HB) synthesis]

Public
BBa_K1362414 (RFC105 A)

version 1

N-terminal start overhang (T)(A)-(G)ATG=RBS+Start RFC[105] A

Public
BBa_K737023

version 1

Promoter that can be induced by phosphate.

Public
BBa_K1321005

version 1

Synthetic Phytochelatin EC(20) RFC[25]

Public
BBa_K737058

version 1

Spot42 is a multitarget small RNA that mediates the discoordinate expression of the E.coli galactose

Public
BBa_K118012

version 1

Synthetic ribosome binding site added by Son of Babel procedure

Public
BBa_J32015 (PelB)

version 1

PelB leader sequence; directs protein to E. coli periplasmic membrane

Public
BBa_K322921 (sacB)

version 1

B. subtilis levansucrase. Lethal to E. coli in presence of sucrose.

Public
BBa_K216005

version 1

PyeaR promoter, responsive to nitrate, nitrite and nitric oxide

Public
BBa_I13401

version 1

GFP reporter for RHS of library test constructs

Public
BBa_E0033 (lacZ a)

version 1

LacZ alpha fragment; complements matching N-terminal deletion mutant (lacZ-omega)

Public
BBa_I715023 (RFP2)

version 1

Carboxyl portion of RFP

Public
BBa_I14033 (Cat)

version 1

P(Cat)

Public
BBa_K748003

version 1

yddV is a Diguanylate Cyclase-Genomic.

Public
BBa_K737026

version 1

Promoter that can be induced by phosphate and carbon starvation.