BBa_J100299

BBa_J100299 Version 1

Component

Source:
http://parts.igem.org/Part:BBa_J100299
Generated By: https://synbiohub.org/public/igem/igem2sbol/1
Created by: Lydia Soifer
Date created: 2016-09-07 11:00:00
Date modified: 2016-09-08 08:11:24

lysine regulated promoter



Types
DnaRegion

Roles
Regulatory

promoter

Sequences BBa_J100299_sequence (Version 1)

Description

This promoter includes the -91 to -81 regions directly upstream of the -35 to 0 region in addition to the sticky ends for BsaI.
Top1- 5' CGACTTTCACTGATATGGCGGCGTAGCGATGCGCTGGTTACTCTGAAAACG
Bot1- 5' CGCCCGTTTTCAGAGTAACCAGCGCATCGCTACGCCGCCATATCAGTGAAA
The -81 to -118 region is known to be a binding sight for lysine repression of the promoter (Bouvier, Jean, et. al 2008). If this whole region is not needed for lysine binding and the lysine will still bind if the binding sight is located directly upstream of the -35 region, the promoter should be activated in the absence of lysine and repressed in the presence of lysine.

Notes

See description.

Source

This sequence is from E. coli.
Bouvier, J., P. Strangler, V. Morales, E. Remy, and C. Gutierrez. "Lysine Represses Transcription of the E. Coli DapB Gene by Preventing Its Activation by the ArgP Activator." Journal of Bacteriology, Aug. 2008. p. 5224-5229.

Sequence Annotation Location Component / Role(s)
-10 box
-35 box
lysine repression site
35,40
12,17
1,11
feature/binding non_covalent_binding_site
non_covalent_binding_site feature/binding
feature/misc sequence_feature
igem#status
Planning
 
synbiohub#ownedBy
user/james
 
synbiohub#ownedBy
user/myers
 
synbiohub#topLevel
BBa_J100299/1