BBa_K1078000

BBa_K1078000 Version 1

Component

Source:
http://parts.igem.org/Part:BBa_K1078000
Generated By: https://synbiohub.org/public/igem/igem2sbol/1
Created by: Edgar Andres Ochoa Cruz
Date created: 2013-09-11 11:00:00
Date modified: 2015-05-08 01:09:03

Mxr1 (methanol expression regulator 1) modified



Types
DnaRegion

Roles
promoter

Regulatory

Sequences BBa_K1078000_sequence (Version 1)

Description

Mxr1 (methanol expression regulator 1) is a key regulator, at transcriptional level, of methanol metabolism in the methylotrophic yeast Pichia pastoris. It is a transcriptional factor that binds upstream of the MUT (methanol utilizing) pathway and peroxisome biogenesis gene??s promoters using its zinc finger domain. Among the MUT genes is the AOX1 gene that is regulated by the pAOX1 promoter. Promoter found three times in the registry of parts; Part:BBa_K431007, Part:BBa_K945000, BBa_I764001, which is use for heterologous protein expression in Pichia.

The 14-3-3 proteins are ubiquitous, and have important roles in controlling a wide variety of cellular processes, like gene expression, metabolism, cell cycle and apoptosis. These 14-3-3 proteins are involved in the carbon source-dependent regulation of Mxr1, which is inactive in ethanol and glycerol, but is active in methanol.

Our submitted Mxr1 is mutated in order to be NOT repressed by methanol, as the original Mxr1 is. This is done by substituted the Ser215 of the protein with Ala, inactivating the 14-3-3 protein interaction (phosphorylation) with Mxr1. It is also smaller than the original Mxr1 because it was already reported that the the major activation domain of Mxr1 is located into the first 400 amino acids.

The modified Mxr1 is able to activate the pAOX promoter, in ethanol, glycerol and methanol. This is useful for our biosensor design, which aims to detect levels of methanol above 2% in common alcoholic drinks (normal content of 10 to 60% ethanol). This will allow government to make high-throughput screening of ethanol drinks tainted will methanol.

Notes

After synthesis, in order to build our sensor the part was introduced in pPIC9K plasmid to allow its genomic recombination into the Pichia pastoris genome, substituting the original Mxr1 found in the yeast.

Source

The part was obtained by synthesis, the modified Mxr1p sequence was found in Parua PK, Ryan PM, Trang K, Young ET: Pichia pastoris 14-3-3 regulates transcriptional activity of the methanol inducible transcription factor Mxr1 by direct interaction. Mol Microbiol 2012, 85:282-298.

Sequence Annotation Location Component / Role(s)
cds
1,1203
CDS feature/cds
igem#experience
None
 
igem#sampleStatus
In stock
igem#status
Available
 
synbiohub#ownedBy
user/james
 
synbiohub#ownedBy
user/myers
 
synbiohub#topLevel
BBa_K1078000/1