pSac-Cm_B

BBa_K1185004 Version 1

Component

Source:
http://parts.igem.org/Part:BBa_K1185004
Generated By: https://synbiohub.org/public/igem/igem2sbol/1
Created by: Vincent Leonardo
Date created: 2013-10-03 11:00:00
Date modified: 2015-05-08 01:09:37

Integration vector for Bacillus subtilis derived from pSac-Cm



Types
DnaRegion

Roles
Plasmid_Backbone

plasmid_vector

Sequences BBa_K1185004_sequence (Version 1)

Description

This plasmid was derived from pSac-Cm by insertion of biobrick compatible restriction sites (prefixes and suffixes), a terminator (BBa_B0015) after the suffixes sequences, and red fluorescent protein sequence (RFP) in between the prefix and suffix in its multiple cloning sites (MCS). New biobricks can be inserted into this vector by replacement of the RFP biobrick, and selection of the white colonies. This backbone has a multi host replication origin and replicates in E. coli. The plasmid is designed to integrate a cloned insert into the B. subtilis chromosome via double recombination between plasmid and chromosomal sacA sequences, and in order to check for integration a simple Phenol Red Sucrose test can be perform, if sacA is no longer functional, they will remain ph7, if they are still able to digest sucrose their pH will be under 5.

Notes

We found that that the integration plasmid that groningen send to the registry were unable to integrate in B. subtilis. This is due to the high number of mutations in the sacA integration region.

Source

Groningen iGEM 2012 team

Sequence Annotation Location Component / Role(s)
B0015
'sacA
bla
'sacA
cat
23,151
167,970
1306,2176
3167,3922
4231,4894
feature/BioBrick engineered_region
feature/cds CDS
CDS feature/cds
feature/cds CDS
CDS feature/cds
igem#experience
Works
 
igem#sampleStatus
Not in stock
igem#status
Unavailable
 
synbiohub#ownedBy
user/james
 
synbiohub#ownedBy
user/myers
 
synbiohub#topLevel
BBa_K1185004/1