RIP

BBa_K237000 Version 1

Component

Source:
http://parts.igem.org/Part:BBa_K237000
Generated By: https://synbiohub.org/public/igem/igem2sbol/1
Created by: Marc T. K. Nielsen
Date created: 2009-08-02 11:00:00
Date modified: 2015-05-08 01:11:36

RIP - Quorum sensing inhibitor of Staphylococcus spp. (Including MRSA)



Types
DnaRegion

Roles
Coding

CDS

Sequences BBa_K237000_sequence (Version 1)

Description

RIP or RNAIII inhibiting peptide is a heptapeptide capable of severely reducing the Qourum sensing(QS) abilities of Staphylococcus species. RIP effectively works as an antibiotic in its inhibition of bacterial growth.

RIP has the sequence YSPXTNF and has been tested extensively in a synthetic (as in organic) form for ability to inhibit bacterial infections in mice.

References will come later.

This is a pure RIP Brick, it contains no signal sequence and we can at this point in our project not verify that it will be exported by our Coli's

Notes

This sequence is reverse-engineered from the amino-acid sequence by using the commonly used codons of E. Coli.

It is designed to provide a big output of peptide. We just hope that this output won't kill the cell.

Source

The RIP peptide is produced by coagulase negative staphylococcus (suggested to be S. warnerii or S. xylosus) (16,19)

Sequence Annotation Location Component / Role(s)
Start
Stop
YSPWTNF
1,3
25,29
4,24
start_codon feature/start
feature/stop stop_codon
feature/cds CDS
igem#experience
None
 
igem#sampleStatus
It's complicated
igem#status
Planning
 
synbiohub#ownedBy
user/james
 
synbiohub#ownedBy
user/myers
 
synbiohub#topLevel
BBa_K237000/1