BBa_Y00073

BBa_Y00073 Version 1

Component

Source:
http://parts.igem.org/Part:BBa_Y00073
Generated By: https://synbiohub.org/public/igem/igem2sbol/1
Created by: Natalie Kuldell
Date created: 2006-06-21 11:00:00
Date modified: 2015-05-08 01:14:54

S. pombe gene SPCC126.04c, coded for S. cerevisiae expression



Types
DnaRegion

Roles
Coding

CDS

Sequences BBa_Y00073_sequence (Version 1)

Description

SPCC126.04c is the pombe homolog of SGF73, a subunit of the SAGA ATP-independent chromatin remodelling complex in S. cerevisiae. Deletion of this subunit from S. cerevisiae leads to viable cells but poor expression of PAU genes under hypoxic conditions. Other phenotypes may also exist but are currently undescribed. The part BBa_Y00073 is the pombe SPCC126.04c ORF (http://www.ncbi.nlm.nih.gov/entrez/viewer.fcgi?val=68037958&itemID=1&view=gbwithparts) that has been codon optimized by DNA2.0 for cerevisiae expression. This may or may not be needed for optimal expression in cerevisiae, though the recoding does leave only 77% (794/1028) bp identities.

Notes

codon optimization for expression in new species

Source

S. pombe gene recoded for S. cerevisiae expression

Sequence Annotation Location Component / Role(s)
prefix
suffix
1,30
1066,1094
feature/BioBrick engineered_region
feature/BioBrick engineered_region
igem#experience
None
 
igem#sampleStatus
It's complicated
igem#status
Planning
 
synbiohub#ownedBy
user/james
 
synbiohub#ownedBy
user/myers
 
synbiohub#topLevel
BBa_Y00073/1